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2011
Adam O, Theobald K, Lavall D, Grube M, Kroemer H K, Ciecholewski S, Schäfers H-J, Böhm M, Laufs U. Increased lysyl oxidase expression and collagen cross-linking during atrial fibrillation. J MOL CELL CARDIOL 2011. E-PUB AHEAD OF PRINT Böger C A, Chen M-H, Tin A, Olden M, Köttgen A, Deboer I H, Fuchsberger CH, O'Seaghdha C M, Pattaro C, Teumer A, Liu CH-T, Glazer N L, Li M, O'Connell J R, Tanaka T, Peralta C A, Kutalik Z, Luan J, Zhao J H, Hwang S-J, Akylbekova E, Kramer H, van der Harst P, Smith A V, Lohman K, de Andrade M, Hayward C, Kollerits B, Tönjes A, Aspelund T, Ingelsson E, Eiriksdottir G, Launer L J, Harris T B, Shuldiner A R, Mitchell B D, Arking D E, Franceschini N, Boerwinkle E, Egan J, Hernandez D, Reilly M, Townsend R R, Lumley T, Siscovick D S, Psaty B M, Kestenbaum B, Haritunians T, Bergmann S, Vollenweider P, Waeber G, Mooser V, Waterworth D, Johnson A D, Florez J C, Meigs J B, Lu X, Turner S T, Atkinson E J, Leak T S, Aasarød K, Skorpen F, Syvänen A-CH, Illig T, Baumert J, Koenig W, Krämer B K, Devuyst O, Mychaleckyj J C, Minelli C, Bakker S J L, Kedenko L, Paulweber B, Coassin S, Endlich K, Kroemer H K, Biffar R, Stracke S, Völzke H, Stumvoll M, Mägi R, Campbell H, Vitart V, Hastie N D, Gudnason V, Kardia S L R, Liu Y, Polasek O, Curhan G, Kronenberg F, Prokopenko I, Rudan I, Arnlöv J, Hallan S, Navis G, CKDGen Consortium T, Parsa A, Ferrucci L, Coresh J, Shlipak M G, Bull S B, Paterson A D, DCCT/ EDIC O B O, Wichmann H-E, Wareham N J, Loos R J F, Rotter J I, Pramstaller P P, Cupples L A, Beckmann J S, Yang Q, Heid I M, Rettig R, Dreisbach A W, Bochud M, Fox C S, Kao W H L. CUBN Is a Gene Locus for Albuminuria. J AM SOC NEPHROL 2011, 22:555-570 Dehghan A, Dupuis J, Barbalic M, Bis J C, Eiriksdottir G, Lu CH, Pellikka N, Wallaschofski H, Kettunen J, Henneman P, Baumert J, Strachan D P, Fuchsberger CH, Vitart V, Wilson J F, Paré G, Naitza S, Rudock M E, Surakka I, de Geus E J C, Alizadeh B Z, Guralnik J, Shuldiner A, Tanaka T, Zee R Y L, Schnabel R B, Nambi V, Kavousi M, Ripatti S, Nauck M, Smith N L, Smith A V, Sundvall J, Scheet P, Liu Y, Ruokonen A, Rose L M, Larson M G, Hoogeveen R C, Freimer N B, Teumer A, Tracy R P, Launer L J, Buring J E, Yamamoto J F, Folsom A R, Sijbrands E J G, Pankow J S, Elliott P, Keaney J F, Sun W, Sarin A-P, Fontes J D, Badola S, Astor B C, Hofman A, Pouta A, Werdan K, Greiser K H, Kuss O, Meyer Zu Schwabedissen H E, Thiery J, Jamshidi Y, Nolte I M, Soranzo N, Spector T D, Völzke H, Parker A N, Aspelund T, Bates D, Young L, Tsui K, Siscovick D S, Guo X, Rotter J I, Uda M, Schlessinger D, Rudan I, Hicks A A, Penninx B W, Thorand B, Gieger CH, Coresh J, Willemsen G, Harris T B, Uitterlinden A G, Järvelin M-R, Rice K, Radke D, Salomaa V, Willems van Dijk K, Boerwinkle E, Vasan R S, Ferrucci L, Gibson Q D, Bandinelli S, Snieder H, Boomsma D I, Xiao X, Campbell H, Hayward C, Pramstaller P P, van Duijn C M, Peltonen L, Psaty B M, Gudnason V, Ridker P M, Homuth G, Koenig W, Ballantyne CH M, Witteman J C M, Benjamin E J, Perola M, Chasman D I. Meta-analysis of genome-wide association studies in >80 000 subjects identifies multiple Loci for C-reactive protein levels. CIRCULATION 2011, 123(7):731-8 Frank S, Schmidt F, Klockgether J, Davenport C F, Gesell Salazar M, Völker U, Tümmler B. Functional genomics of the initial phase of coldadaptation of Pseudomonas putida KT2440. FEMS Microbiol Lett 2011 (318):47–54 Grabe H J, Mahler J, Witt S H, Schulz A, Appel K, Spitzer C, Stender J P, Barnow S, Freyberger H J, Teumer A, Völzke H, Rietschel M. A risk marker for alcohol dependence on chromosome 2q35 is related to neuroticism in the general population. MOL PSYCHIATR 2011, 16(2):126-28 Hammer E, Goritzka M, Ameling S, Darm K, Steil L, Klingel K, Trimpert C, Herda L R, Dörr M, Kroemer H K, Kandolf R, Staudt A, Felix S B, Völker U. Characterization of the Human Myocardial Proteome in Inflammatory Holtfreter S, Jursa-Kulesza J, Masiuk H, Verkaik N J, de Vogel C, Kolata J, Nowosiad M, Steil L, van Wamel W, van Belkum A, Völker U, Giedrys-Kalemba S, Bröker B M. Antibody responses in furunculosis patients vaccinated with autologous formalin-killed Staphylococcus aureus. EUR J CLIN MICROBIOL INFECT DIS 2011 (30):707–717 Kaplan R C, Petersen A K, Chen M-H, Teumer A, Glazer N, Döring A, Lam C S, Friedrich N, Newman A, Müller M, Yang Q, Homuth G, Cappola A, Klopp N, Smith H, Ernst F, et al. A genome-wide association study identifies novel loci associated with circulating IGF-I and IGFBP-3. HUM MOL GENET 2011, 20(6):1241-1251 Liebeke M, Dörries K, Zühhlke D, Bernhardt J, Fuchs S, Pané-Farré J, Engelmann S, Völker U, Bode R, Dandekar T, Lindequist U, Hecker M, Lalk M. A metabolomics and proteomics study of the adaptation of Mäder U, Nicolas P, Richard H, Bessieres P, Aymerich S. Comprehensive identification and quantification of microbial transcriptomes by genome-wide unbiased methods. CURR OPIN BIOTECH 2011, 22:32-41 Meyer F M, Gerwig J, Hammer E, Herzberg C, Commichau F M, Völker U, Stülke J. Physical interactions between tricarboxylic acid cycle enzymes in Bacillus subtilis: evidence for a metabolon. METAB ENG 2011, 13(1):18-27 Suhre K, Wallaschofski H, Raffler J, Friedrich N, Haring R, Michael K, Wasner C, Krebs A, Kronenberg F, Chang D, Meisinger C, Wichmann H-E, Hoffmann W, Völzke H, Völker U, Teumer A, Biffar R, Kocher T, Felix S B, Illig T, Kroemer T K, Gieger C, Römisch-Margl W, Nauck M. A genome-wide association study of metabolic traits in human urine. NATURE GENETICS 2011, E-PUB AHEAD OF PRINT Ummanni R, Mundt F, Pospisil H, Venz S, Scharf CH, Barett CH, Fälth M, Köllermann J, Walther R, Schlomm T, Sauter G, Bokemeyer C, Sültmann H, Schuppert A, Brümmendorf T H, Balabanov S. Identification of Clinically Relevant Protein Targets in Prostate Cancer with 2D-DIGE Coupled Mass Spectrometry and Systems Biology Network Platform. PLOS ONE 2011, 6(2):1-14 Völzke H, Alte D, Schmidt C O, Radke D, Lorbeer R, Friedrich N, Aumann N, Lau K, Piontek M, Born G, Havemann CH, Ittermann T, Schipf S, Haring R, Baumeister S E, Wallaschofski H, Nauck M, Frick S, Arnold A, Jünger M, Mayerle J, Kraft M, Lerch M M, Dörr M, Reffelmann T, Empen K, Felix S B, Pietsch A, Koch B, Gläser S, Ewert R, Fietze I, Penzel T, Dören M, Rathmann W, Haerting J, Hannemann M, Röpcke J, Schminke U, Jürgens C, Tost F, Rettig R, Kors J A, Ungerer S, Hegenscheid K, Kühn J-P, Zech j, Hosten N, Puls R, Henke K, Gloger O, Teumer A, Homuth G, Völker U, Schwahn CH, Holtfreter B, Polzer I, Kohlmann T, Grabe H J, Rosskopf D, Kroemer H K, Kocher T, Biffar R, John U, Hoffmann W. Cohort Profile: The Study of Health in Pomerania. INT J EPIDEMIOL 2011, 40(2):294-307 Zhai G, Teumer A, Stolk L, Perry J R B, Vandenput L, Coviello A D, Koster A, Bell J T, Bhasin S, Eriksson J, Eriksson A, Ernst F, Ferrucci L, Frayling T M, Glass D, Grundberg E,
Haring R, Hedman A K, Hofman A, Kiel D P, Kroemer H K, Liu Y, Lunetta K L, Maggio M, Lorentzon M, Mangino M, Melzer D, Miljkovic I, MuTHER Consortium, Nica A, Penninx B W J H,
Vasan R S, Rivadeneira F, Small K S, Soranzo N, Uitterlinden A G,
2010
Adam O, Lavall D, Theobald K, Hohl M, Grube M, Ameling S, Sussmann M A, Rosenkranz S, Kroemer H K, Schäfers H-J, Böhm M, Laufs U. Rac1-Induced Connective Tissue Growth Factor Regulates Connexin 43 and N-Cadherin Expression in Atrial Fibrillation. J AM COLL CARDIOL 2010, 55:469-480 Bastida F, Rosell M, Franchini A G, Seifert J, Finsterbusch S, Jehmlich N, Jechalke S, von Bergen M, Richnow H-H. Elucidating MTBE degradation in a mixed consortium using a multidisciplinary approach. FEMS MICROBIOL ECOL 2010, 73(2):370-84 Eijgelsheim M, Newton-Cheh CH, Sotoodehnia N, de Bakker P I, Müller M, Morrison A C, Smith A V, Isaacs A, Sanna S, Dörr M, Navarro P, Fuchsberger CH, Nolte I M, de Geus E J C, Estrada K, Hwang S-J, Bis J C, Rückert I-M, Alonso A, Launer L J, Hottenga J-J, Rivadeneira F, Noseworthy P A, Rice K M, Perz S, Arking D E, Spector T D, Kors J A, Aulchenko Y S, Tarasov K V, Homuth G, Wild S H, Marroni F, Gieger CH, Licht C M, Prineas R J, Hofman A, Rotter J I, Hicks A A, Ernst F, Najjar S S, Wright A F, Peters A, Fox E R, Oostra B A, Kroemer H K, Couper D, Völzke H, Campbell H, Meitinger T, Uda M, Witteman J C M, Psaty B M, Wichmann H-E, Harris T B, Kääb S, Siscovick D S, Jamshidi Y, Uitterlinden A G, Folsom A R, Larson M G, Wilson J F, Penninx B W, Snieder H, Pramstaller P P, van Duijn C M, Lakatta E G, Felix S B, Gudnason V, Pfeufer A, Heckbert S R, Stricker B H CH, Boerwinkle E, O'Donnell CH J. Genome-wide association analysis identifies multiple loci related to resting heart rate. HUM MOL GENET 2010, 19(19):3885-94 Ernst F D, Uhr K, Teumer A, Fanghänel J, Schulz M, Noack B, Gonzales J, Reichert S, Eickholz P, Holtfreter B, Meisel P, Linden G J, Homuth G, Kocher T. Replication of the association of chromosomal region 9p21.3 with generalized aggressive periodontitis (gAgP) using an independent case-control cohort. BMC MED GENET 2010, 11:119 Fetzer I, Jehmlich N, Vogt C, Richow H-H, Seifert J, Harms H, von Bergen M, Schmidt F. Calculation of partial isotope incorporation into peptides measured by mass spectrometry. BMC Research Notes 2010, 3:178-186 Fuchs S, Mehlan H, Kusch H, Teumer A, Zühlke D, Berth M, Wolf C, Dandekar T, Hecker M, Engelmann S, Bernhardt J. Protecs, a comprehensive and powerful storage and analysis system for OMICS data, applied for profiling the anaerobiosis response of Staphylococcus aureus COL. PROTEOMICS 2010, 10(16):2982-3000 Gimpel M, Heidrich N, Mäder U, Krügel H, Brantl S. A dual-function sRNA from B. subtilis: SR1 acts as a peptide encoding mRNA on the gapA operon. MOL MICROBIOL 2010, 76(4):990-1009 Grabarczyk P, Nähse V, Delin M, Przybylski G, Depke M, Hildebrandt P, Völker U, Schmidt CH A. Increased expression of bcl11b leads to chemoresistance accompanied by g1 accumulation. PLoS ONE 2010, 5(9):e12532 Grabe H J, Schwahn CH, Appel K, Mahler J, Schulz A, Spitzer C, Fenske K, Barnow S, Lucht M, Freyberger H J, John U, Teumer A, Wallaschofski H, Nauck M, Völzke H. Childhood maltreatment, the corticotropin-releasing hormone receptor gene and adult depression in the general population. AM J MED GENET B 2010, 153(8):1483-93 Greinacher A, Wesche J, Hammer E, Fürll B, Völker U, Reil A, Bux J. Characterization of the human neutrophil alloantigen-3a. NAT MED 2010, 16(1):45-48 Hahne H, Mäder U, Otto A, Bonn F, Steil L, Bremer E, Hecker M, Becher D. A comprehensive proteomics and transcriptomics analysis of Bacillus subtilis salt stress adaptation. J BACTERIOL 2010, 192(3):870-882 Hammer E, Bien S, Gesell Salazar M, Steil L, Scharf CH, Hildebrandt P, Schroeder H W S, Kroemer H K, Völker U, Ritter CH A. Proteomic analysis of doxorubicin induced changes in the proteome of HepG2cells combining 2D-DIGE and LC-MS/MS approaches. PROTEOMICS 2010, 10(1):99-114 Hammer E, Phong T Q, Steil L, Klingel K, Gesell Salazar M, Bernhardt J, Kandolf R, Kroemer H K, Felix S B, Völker U. Viral myocarditis induced by Coxsackievirus B3 in A.BY/SnJ mice: Analysis of changes in the myocardial proteome. PROTEOMICS 2010, 10:1802-1818 Hauberg L, Schmidt F, Scharf CH, Dörr J, Völker U, Reinhold-Hurek B. Proteomic characterization of a pilR regulatory mutant of Azoarcus sp. strain BH72 with the aid of gel-based and gel-free approaches. PROTEOMICS 2010, 10(3):458-469 Heid I M, Jackson A U, Randall J C, Winkler T, Qi L, Steinthorsdottir V, Thorleifsson G, Zillikens M C, Speliotes E, Mägi R, Workalemahu T, White CH C, Bouatia-Naji N, Harris T B, Berndt S I, Ingelsson E, Willer C J, Weedon M N, Luan J, Vedantam S, Esko T, Kilpeläinen T O, Kutalik Z, Li S, Monda K L, Dixon A L, Holmes CH C, Kaplan L M, Liang L, Min J L, Moffatt M F, Molony C, Nicholson G, Schadt E E, Zondervan K T, Feitosa M F, Ferreira T, Allen H L, Weyant R J, Wheeler E, Wood A R, Estrada K, Goddard M E, Lettre G, Mangino M, Nyholt D R, Purcell S, Smith A V, Visscher P M, Yang J, McCarroll S A, Nemesh J, Voight B F, Absher D, Amin N, Aspelund T, Coin L, Glazer N L, Hayward C, Heard-Costa N L, Hottenga J-J, Johansson A, Johnson T, Kaakinen M, Kapur K, Ketkar S, Knowles J W, Kraft P, Kraja A T, Lamina C, Leitzmann M F, McKnight B, Morris A P, Ong Y K, Perry J R B, Peters M J, Polasek O, Prokopenko I, Rayner N W, Ripatti S, Rivadeneira F, Robertson N R, Sanna S, Sovio U, Surakka I, Teumer A, van Wingerden S, Vitart V, Zhao J H, Cavalcanti-Proença CH, Chines P S, Fisher E, Kulzer J R, Lecoeur C, Narisu N, Sandholt C, Scott L J, Silander K, Stark K, Tammesoo M-L, Teslovich T M, Timpson N J, Watanabe R M, Welch R, Chasman D I, Cooper M N, Jansson J-O, Kettunen J, Lawrence R W, Pellikka N, Perola M, Vandenput L, Alavere H, Almgren P, Atwood L D, Bennett A J, Biffar R, Bonnycastle L L, Bornstein S R, Buchanan T A, Campbell H, Day I N M, Dei M, Dörr M, Elliott P, Erdos M R, Eriksson J G, Freimer N B, Fu M, Gaget S, Geus E J C, Gjesing A P, Grallert H, Grässler J, Groves CH J, Guiducci C, Hartikainen A-L, Hassanali N, Havulinna A S, Herzig K-H, Hicks A A, Hui J, Igl W, Jousilahti P, Jula A, Kajantie E, Kinnunen L, Kolcic I, Koskinen S, Kovacs P, Kroemer H K, Krzelj V, Kuusisto J, Kvaloy K, Laitinen J, Lantieri O, Lathrop G M, Lokki M-L, Luben R N, Ludwig B, McArdle W L, McCarthy A, Morken M A, Nelis M, Neville M J, Paré G, Parker A N, Peden J F, Pichler I, Pietiläinen K H, Platou C G P, Pouta A, Ridderstråle M, Samani N J, Saramies J, Sinisalo J, Smit J H, Strawbridge R, Stringham H M, Swift A J, Teder-Laving M, Thomson B, Usala G, van Meurs J B J, van Ommen G-J, Vatin V, Volpato C B, Wallaschofski H, Walters G B, Widen E, Wild S H, Willemsen G, Witte D R, Zgaga L, Zitting P, Beilby J P, James A L, Kähönen M, Lehtimäki T, Nieminen M S, Ohlsson C, Palmer L J, Raitakari O, Ridker P M, Stumvoll M, Tönjes A, Viikari J, Balkau B, Ben-Shlomo Y, Bergman R N, Boeing H, Smith G D, Ebrahim S, Froguel P, Hansen T, Hengstenberg CH, Hveem K, Isomaa B, Jørgensen T, Karpe F, Khaw K-T, Laakso M, Lawlor D A, Marre M, Meitinger T, Metspalu A, Midthjell K, Pedersen O, Salomaa V, Schwarz P S, Tuomi T, Tuomilehto J, Valle T T, Wareham N J, Arnold A M, Beckmann J S, Bergmann S, Boerwinkle E, Boomsma D I, Caulfield M, Collins F S, Eiriksdottir G, Gudnason V, Gyllensten U, Hamsten A, Hattersley A T, Hofman A, Hu F B, Illig T, Iribarren C, Jarvelin M-R, Kao W H L, Kaprio J, Launer L J, Munroe P B, Oostra B A, Penninx B W, Pramstaller P P, Psaty B M, Quertermous T, Rissanen A, Rudan I, Shuldiner A R, Soranzo N, Spector T D, Syvänen A-CH, Uda M, Uitterlinden A G, Völzke H, Vollenweider P, Wilson J F, Witteman J C, Wright A F, Abecasis G R, Boehnke M, Borecki I B, Deloukas P, Frayling T M, Groop L C, Haritunians T, Hunter D J, Kaplan R C, North K E, O'Connell J R, Peltonen L, Schlessinger D, Strachan D P, Hirschhorn J N, Assimes T L, Wichmann H-E, Thorsteinsdottir U, van Duijn C M, Stefansson K, Cupples L A, Loos R J F, Barroso I, McCarthy M I, Fox C S, Mohlke K L, Lindgren C M. Meta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution. NAT GENET 2010, 42(11):949-60 Ikram M K, Xiong M, Jensen R, Colosio C, Hewelt A, Ikram M A, Wang J, Klein R, Klein L, Baudler M, Cheung J, Liu F-Y, Mitchell T J, Uitterlinden A G, Rivadeneira F, Hofman A, de Jong P E, van Duijn C M, Kao W H L, Cheng S, Smith A V, Glazer N L, Lumley T, McKnight B, Psaty B M, Jansson B, Eiriksdottir G, Aspelund T, Harris T B, Launer L J, Taylor G J, Li M, Iyengar S K, Xu Q, Sivakumaran T A, Muigg D, Macgregor S, Martin N G, Young P, Busse J, Wagner K, Heckbert S R, Hammond N, Andreae M O, Fu M, Audi G, Hewlett E R, Scott R, Islam F M A, Rotter J I, McAuley M, Boerwinkle E, Tu Z, Gudnason V, Siscovick D S, Vingerling J R, Wong W. Four novel Loci (19q13, 6q24, 12q24, and 5q14) influence the microcirculation in vivo. PLOS GENET 2010, 6(10):e1001184 Jehmlich N, Hübschmann T, Gesell Salazar M, Völker U, Benndorf D, Müller S, von Bergen M, Schmidt F. Advanced tool for characterization of microbial cultures by combining cytomics and proteomics. APPL MICROBIOL BIOT 2010, 88(2):575-84 Jehmlich N, Fetzer I, Seifert J, Mattow J, Vogt C, Harms H, Thiede B, Richnow H-H, von Bergen M, Schmidt F. Decimal place slope: a fast and precise method for quantifying 13C incorporation levels for detecting the metabolic activity of microbial species. MOL CELL PROTEOMICS 2010, 9(6):1221-7 Jehmlich N, Kleinsteuber S, Vogt C, Benndorf D, Harms H, Schmidt F, von Bergen M, Seifert J. Phylogenetic and proteomic analysis of an anaerobic toluene-degrading community. J APPL MICROBIOL 2010, 109(6):1937-45 Kneist S, Schmidt F, Callaway A, Willershausen B, Rupf S, Wicht M, Thiede B. Diversity of Lactobacillus species in deep carious lesions of primary molars. Eur Arch Paediatr Dent 2010, 11(4):181-6 Köck K, Koenen A, Giese T, Fraunholz M, May K, Siegmund W, Hammer E, Völker U, Jedlitschky G, Kroemer H K, Grube M. Rapid modulation of the organic anion transporting polypeptide 2B1 (OATP2B1, SLCO2B1) function by protein kinase C-mediated internalization. J BIOL CHEM 2011, 285(15):11336-47 Köttgen A, Pattaro C, Böger C, Fuchsberger CH, Olden M, Glazer N L, Parsa A, Gao X, Yang Q, Smith A V, O'Connell J R, Li M, Schmidt H, Tanaka T, Isaacs A, Ketkar S, Hwang S-J, Johnson A D, Dehghan A, Teumer A, Paré G, Atkinson E J, Zeller T, Lohmann K, Cornelis M C, Probst-Hensch N M, Kronenberg F, Tönjes A, Hayward C, Aspelund T, Eiriksdottir G, Launer L J, Harris T B, Rampersaud E, Mitchell B D, Arking D E, Boerwinkle E, Struchalin M, Cavalieri M, Singleton A B, Giallauria F, Metter M, de Boer I H, Haritunians T, Lumley T, Siscovick D S, Psaty B M, Zillikens M C, Oostra B A, Feitosa M, Province M, de Andrade M, Turner S T, Schillert A, Ziegler A, Wild P S, Schnabel R B, Wilde S, Munzel T F, Leak T S, Illig T, Klopp N, Meisinger CH, Wichmann H-E, Koenig W, Zgaga L, Zemunik T, Kolcic I, Minelli C, Hu F B, Johansson A, Igl W, Zaboli G, Wild S H, Wright A F, Campbell H, Ellinghaus D, Schreiber S, Aulchenko Y S, Felix J F, Rivadeneira F, Uitterlinden A G, Hofman A, Imboden M, Nitsch D, Brandstätter A, Kollerits B, Kedenko L, Mägi R, Stumvoll M, Kovacs P, Boban M, Campbell S, Endlich K, Völzke H, Kroemer H K, Nauck M, Völker U, et al. New loci associated with kidney function and chronic kidney disease. NAT GENET 2010, 42(5):376-84 Lammers CH R, Flórez L A, Schmeisky A G, Roppel S F, Mäder U, Hamoen L, Stülke J. Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis. Microbiology 2010, 156:849-59 Liebal U W, Millat T, de Jong I G, Kuipers O P, Völker U, Wolkenhauer O. How mathematical modelling elucidates signalling in B. subtilis. MOL MICROBIOL 2010, 77(5):1083-95 Leibeling S, Schmidt F, Jehmlich N, von Bergen M, Müller R H, Harms H. Declining capacity of starving Delftia acidovorans MC1 to degrade phenoxypropionate herbicides correlates with oxidative modification of the initial enzyme. ENVIRON SCI TECHNOL 2010, 44(10):3793-9 Liu J Z, Tozzi F, Waterworth D M, Pillai S G, Muglia P, Middleton L, Berrettini W, Knouff CH W, Yuan X, Waeber G, Vollenweider P, Preisig M, Wareham N J, Zhao J H, Loos R J F, Barroso I, Khaw K-T, Grundy S, Barter P, Mahley R, Kesaniemi A, McPherson R, Vincent J B, Strauss J, Kennedy J L, Farmer A, McGuffin P, Day R, Matthews K, Bakke P, Gulsvik A, Lucae S, Ising M, Brueckl T, Horstmann S, Wichmann H-E, Rawal R, Dahmen N, Lamina C, Polasek O, Zgaga L, Huffman J, Campbell S, Kooner J S, Chambers J C, Burnett M-S, Devaney J M, Pichard A D, Kent K M, Satler L, Lindsay J M, Waksman R, Epstein S E, Wilson J F, Wild S H, Campbell H, Vitart V, Reilly M P, Li M, Qu L, Wilensky R, Matthai W, Hakonarson H H, Rader D J, Franke A, Wittig M, Schäfer A, Uda M, Terracciano A, Xiao X, Busonero F, Scheet P, Schlessinger D, St Clair D, Rujescu D, Abecasis G R, Grabe H J, Teumer A, Völzke H, Petersmann A, John U, et al. Meta-analysis and imputation refines the association of 15q25 with smoking quantity. NAT GENET 2010, 42(5):436-40 Meyer T, Verwoert G C, Hwang S-J, Glazer N L, Smith A V, van Rooij F J A, Ehret G B, Boerwinkle E, Felix J F, Leak T S, Harris T B, Yang Q, Dehghan A, Aspelund T, Katz N, Homuth G, Kocher T, Rettig R, Ried W, Gieger CH, Parrish J E, Pfeufer A, Meitinger T, Coresh J, Hofman A, Siering M, Chen Y, Uitterlinden A G, Chakravarti A, Psaty B M, van Duijn C M, Kao W H L, Witteman J C M, Gudnason V, Siscovick D S, Fox C S, Köttgen A. Genome-wide association studies of serum magnesium, potassium, and sodium concentrations identify six Loci influencing serum magnesium levels. PLOS GENET 2010, 6(8):e1001045 Mikolasch A, Hahn V, Manda K, Pump J, Illas N, Gördes D, Lalk M, Gesell Salazar M, Hammer E, Jülich W-D, Rawer S, Thurow K, Lindequist U, Schauer F. Laccase-catalyzed cross-linking of amino acids and peptides with dihydroxylated aromatic compounds. AMINO ACIDS 2010, 39(3):671-83 Karanam N K, Grabarczyk P, Hammer E, Scharf CH, Venz S, Gesell Salazar M, Barthlen W, Przybylski G, Schmidt CH A, Völker U. Proteome analysis reveals new mechanisms of Bcl11b-loss driven apoptosis. J PROTEOME RES 2010, 9(8):3799-811 Lango Allen H, Estrada K, Lettre G, Berndt S I, Weedon M N, Rivadeneira F, Willer C J, Jackson A U, Vedantam S, Raychaudhuri S, Ferreira T, Wood A R, Weyant R J, Segrè A V, Speliotes E, Wheeler E, Soranzo N, Park J-H, Yang J, Gudbjartsson D, Heard-Costa N L, Randall J C, Qi L, Vernon Smith A, Mägi R, Pastinen T, Liang L, Heid I M, Luan J, Thorleifsson G, Winkler T, Goddard M E, Sin Lo K, Palmer C, Workalemahu T, Aulchenko Y S, Johansson A, Zillikens M C, Feitosa M F, Esko T, Johnson T, Ketkar S, Kraft P, Mangino M, Prokopenko I, Absher D, Albrecht E, Ernst F, Glazer N L, Hayward C, Hottenga J-J, Jacobs K, Knowles J W, Kutalik Z, Monda K L, Polasek O, Pross M, Rayner N W, Robertson N R, Steinthorsdottir V, Tyrer J P, Voight B F, Wiklund F, Xu X, Hua Zhao J, Nyholt D R, Pellikka N, Perola M, Perry J R B, Surakka I, Tammesoo M-L, Altmaier E L, Amin N, Aspelund T, Bhangale T, Boucher G, Chasman D I, Chen C, Coin L, Cooper M N, Dixon A L, Gibson Q, Grundberg E, Hao K, Juhani Junttila M, Kaplan L M, Kettunen J, König I R, Kwan T, Lawrence R W, Levinson D F, Lorentzon M, McKnight B, Morris A P, Müller M, Suh Ngwa J, Purcell S, Rafelt S, Salem R M, Salvi E, Sanna S, Shi J, Sovio U, Thompson J R, Turchin M C, Vandenput L, Verlaan D J, Vitart V, White CH C, Ziegler A, Almgren P, Balmforth A J, Campbell H, Citterio L, De Grandi A, Dominiczak A, Duan J, Elliott P, Elosua R, Eriksson J G, Freimer N B, Geus E J C, Glorioso N, Haiqing S, Hartikainen A-L, Havulinna A S, Hicks A A, Hui J, Igl W, Illig T, Jula A, Kajantie E, Kilpeläinen T O, Koiranen M, Kolcic I, Koskinen S, Kovacs P, Laitinen J, Liu Y, Lokki M-L, Marusic A, Maschio A, Meitinger T, Mulas A, Paré G, Parker A N, Peden J F, Petersmann A, Pichler I, Pietiläinen K H, Pouta A, Ridderstråle M, Rotter J I, Sambrook J G, Sanders A R, Oliver Schmidt C, Sinisalo J, Smit J H, Stringham H M, Bragi Walters G, Widen E, Wild S H, Willemsen G, Zagato L, Zgaga L, Zitting P, Alavere H, Farrall M, McArdle W L, Nelis M, Peters M J, Ripatti S, van Meurs J B J, Aben K K, Ardlie K, Beckmann J S, Beilby J P, Bergman R N, Bergmann S, Collins F S, Cusi D, den Heijer M, Eiriksdottir G, Gejman P V, Hall A S, Hamsten A, Huikuri H V, Iribarren C, Kähönen M, Kaprio J, Kathiresan S, Kiemeney L, Kocher T, Launer L J, Lehtimäki T, Melander O, Mosley T H, Musk A W, Nieminen M S, O'Donnell CH J, Ohlsson C, Oostra B A, Palmer L J, Raitakari O, Ridker P M, Rioux J D, Rissanen A, Rivolta C, Schunkert H, Shuldiner A R, Siscovick D S, Stumvoll M, Tönjes A, Tuomilehto J, van Ommen G-J, Viikari J, Heath A C, Martin N G, Montgomery G W, Province M A, Kayser M, Arnold A M, Atwood L D, Boerwinkle E, Chanock S J, Deloukas P, Gieger CH, Grönberg H, Hall P, Hattersley A T, Hengstenberg CH, Hoffman W, Mark Lathrop G, Salomaa V, Schreiber S, Uda M, Waterworth D, Wright A F, Assimes T L, Barroso I, Hofman A, Mohlke K L, Boomsma D I, Caulfield M, Adrienne Cupples L, Erdmann J, Fox C S, Gudnason V, Gyllensten U, Harris T B, Hayes R B, Jarvelin M-R, Mooser V, Munroe P B, Ouwehand W H, Penninx B W, Pramstaller P P, Quertermous T, Rudan I, Samani N J, Spector T D, Völzke H, Watkins H, Wilson J F, Groop L C, Haritunians T, Hu F B, Kaplan R C, Metspalu A, North K E, Schlessinger D, Wareham N J, Hunter D J, O'Connell J R, Strachan D P, Wichmann H-E, Borecki I B, van Duijn C M, Schadt E E, Thorsteinsdottir U, Peltonen L, Uitterlinden A G, Visscher P M, Chatterjee I, Loos R J F, Boehnke M, McCarthy M I, Ingelsson E, Lindgren C M, Abecasis G R, Stefansson K, Frayling T M, Hirschhorn J N. Hundreds of variants clustered in genomic loci and biological pathways affect human height. NATURE 2010, 467(7317):832-8 Otto A, Bernhardt J, Meyer H, Schaffer M, Herbst F A, Siebourg J, Mäder U, Lalk M, Hecker M, Becher D. Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis. Nature Communications 2010, 1(137) Padmanabhan S, Melander O, Johnson T, Di Blasio A M, Lee W K, Gentili C, Hastie C E, Menni C, Mende K, Delles CH, Laing S, Corso B, Navis G, Kwakernaak A J, van der Harst P, Bochud M, Maillard M, Burnier M, Hedner T, Kjeldsen S, Wahlstrand B, Sjögren M, Fava C, Montagnana M, Danese E, Torffvit O, Hedblad B, Snieder H, Connell J M, Brown M, Samani N J, Farrall M, Cesana G, Mancia G, Signorini S, Grassi G, Eyheramendy S, Wichmann H E, Laan M, Strachan D P, Sever P, Shields P, Stanton A, Vollenweider P, Teumer A, Völzke H, Rettig R, Newton-Cheh CH, Arora P, Zhang F, Soranzo N, Spector T D, Lucas G, Kathiresan S, Siscovick D S, Luan J, Loos R J F, Wareham N J, Penninx B W, Nolte I M, McBride M, Miller W H, Nicklin S A, Becker A, Graham T, McDonald R A, Pell J P, Sattar N, Welsh P, Munroe P, Caulfield M, Zanation A, Dominiczak A. Genome-wide association study of blood pressure extremes identifies variant near UMOD associated with hypertension. PLOS GENET 2010, 6(10):e1001177 Repapi E, Sayers I, Wain L V, Burton P R, Johnson T, Obeidat M, Zhao J H, Ramasamy A, Zhai G, Vitart V, Huffman J E, Igl W, Albrecht E, Deloukas P, Henderson J, Granell R, McArdle W L, Rudnicka A R, Barroso I, Loos R J F, Wareham N J, Mustelin L, Rantanen T, Surakka I, Imboden M, Wichmann H E, Grkovic I, Jankovic S, Zgaga L, Hartikainen A-L, Peltonen L, Gyllensten U, Johansson A, Zaboli G, Campbell H, Wild S H, Wilson J F, Gläser S, Homuth G, Völzke H, Mangino M, Soranzo N, Spector T D, Polasek O, Rudan I, Wright A F, Heliövaara M, Ripatti S, Pouta A, Naluai A T, Olin A-C, Torén K, Cooper M N, James A L, Palmer L J, Hingorani A D, Wannamethee S G, Whincup P H, Smith G D, Ebrahim S, McKeever T M, Pavord I D, MacLeod A K, Morris A D, Porteous D J, Cooper C, Dennison E, Shaheen S, Karrasch S, Schnabel E, Schulz H, Grallert H, Bouatia-Naji N, Delplanque J, Froguel P, Blakey J D, Britton J R, Morris R W, Holloway J W, Lawlor D A, Hui J, Nyberg F, Jarvelin M-R, Jackson C, Kähönen M, Kaprio J, Probst-Hensch N M, Koch B, Hayward C, Evans D M, Elliott P, Strachan D P, Hall I P, Tobin M D. Genome-wide association study identifies five loci associated with lung function. NAT GENET 2010, 42(1):36-44 Schmidt F, Dahlmann B, Hustoft H K, Koehler CH J, Strozynski M, Kloß A, Zimny-Arndt U, Jungblut P R, Thiede B. Quantitative proteome analysis of the 20S proteasome of apoptotic Jurkat T cells. AMINO ACIDS 2010. E-PUB AHEAD OF PRINT Schmidt F, Scharf S S, Hildebrandt P, Burian M S, Bernhardt J, Dhople V M, Kalinka J, Gutjahr M, Hammer E, Völker U. Time-resolved quantitative proteome profiling of host-pathogen interactions: the response of Staphylococcus aureus RN1HG to internalisation by human airway epithelial cells. PROTEOMICS 2010, 10(15):2801-11 Selesi D, Jehmlich N, von Bergen M, Schmidt F, Rattei T, Tischler P, Lueders T, Meckenstock R U. Combined genomic and proteomic approaches identify gene clusters involved in anaerobic 2-methylnaphthalene degradation in the sulfate-reducing enrichment culture N47. J BACTERIOL 2010, 192(1):295-306 Sotoodehnia N, Isaacs A, de Bakker P I, Dörr M, Newton-Cheh CH, Nolte I M, van der Harst P, Müller M, Eijgelsheim M, Alonso A, Hicks A A, Padmanabhan S, Hayward C, Smith A V, Polasek O, Giovannone S, Fu J, Magnani J W, Marciante K D, Pfeufer A, Gharib S A, Teumer A, Li M, Bis J C, Rivadeneira F, Aspelund T, Köttgen A, Johnson T, Rice K, Sie M P S, Wang Y A, Klopp N, Fuchsberger CH, Wild S H, Mateo Leach I, Estrada K, Völker U, Wright A F, Asselbergs F W, Qu J, Chakravarti A, Sinner M F, Kors J A, Petersmann A, Harris T B, Soliman E Z, Munroe P B, Psaty B M, Oostra B A, Cupples L A, Perz S, de Boer R A, Uitterlinden A G, Völzke H, Spector T D, Liu F-Y, Boerwinkle E, Dominiczak A, Rotter J I, van Herpen G, Levy D, Wichmann H-E, van Gilst W H, Witteman J C M, Kroemer H K, Kao W H L, Heckbert S R, Meitinger T, Hofman A, Campbell H, Folsom A R, van Veldhuisen D J, Schwienbacher CH, O'Donnell CH J, Volpato C B, Caulfield M, Connell J M, Launer L J, Lu X, Franke L, Fehrmann R S N, te Meerman G, Groen H J M, Weersma R K, van den Berg L H, Wijmenga C, Ophoff R A, Navis G, Rudan I, Snieder H, Wilson J F, Pramstaller P P, Siscovick D S, Wang T J, Gudnason V, van Duijn C M, Felix S B, Fishman G I, Jamshidi Y, Stricker B H CH, Samani N J, Kääb S, Arking D E. Common variants in 22 loci are associated with QRS duration and cardiac ventricular conduction. NAT GENET 2010, 42(12):1068-76 Speliotes E, Willer C J, Berndt S I, Monda K L, Thorleifsson G, Jackson A U, Allen H L, Lindgren C M, Luan J, Mägi R, Randall J C, Vedantam S, Winkler T, Qi L, Workalemahu T, Heid I M, Steinthorsdottir V, Stringham H M, Weedon M N, Wheeler E, Wood A R, Ferreira T, Weyant R J, Segrè A V, Estrada K, Liang L, Nemesh J, Park J-H, Gustafsson S, Kilpeläinen T O, Yang J, Bouatia-Naji N, Esko T, Feitosa M F, Kutalik Z, Mangino M, Raychaudhuri S, Scherag A, Smith A V, Welch R, Zhao J H, Aben K K, Absher D, Amin N, Dixon A L, Fisher E, Glazer N L, Goddard M E, Heard-Costa N L, Hassel A, Hottenga J-J, Johansson A, Johnson T, Ketkar S, Lamina C, Li S, Moffatt M F, Meyers P M, Narisu N, Perry J R B, Peters M J, Pross M, Ripatti S, Rivadeneira F, Sandholt C, Scott L J, Timpson N J, Tyrer J P, van Wingerden S, Watanabe R M, White CH C, Wiklund F, Barlassina CH, Chasman D I, Cooper M N, Jansson J-O, Lawrence R W, Pellikka N, Prokopenko I, Shi J, Trinka E, Alavere H, Albrecht M, Almgren P, Arnold A M, Aspelund T, Atwood L D, Balkau B, Balmforth A J, Bennett A J, Ben-Shlomo Y, Bergman R N, Bergmann S, Biebermann H, Blohmer J, Bosse A, Bonnycastle L L, Bornstein S R, Brown J, Buchanan T A, Busonero F, Campbell H, Cuypers H, Cavalcanti-Proença CH, Chen Y, Chen CH-M, Chines P S, Clarke R, Coin L, Connell J, Day I N M, Heger M, Duan J, Ebrahim S, Elliott P, Elosua R, Eiriksdottir G, Erdos M R, Eriksson J G, Fuchs J, Felix S B, Fischer-Posovszky P, Folsom A R, Friedrich N, Freimer N B, Fu M, Gaget S, Gejman P V, Geus E J C, Gieger CH, Gjesing A P, Goel A, Guyatt G H, Grallert H, Grässler J, Grunwald L-M, Groves CH J, Gudnason V, Guiducci C, Hartikainen A-L, Hassanali N, Hall A S, Havulinna A S, Hayward C, Heath A C, Hengstenberg CH, Hicks A A, Hinney A, Hofman A, Homuth G, Hui J, Igl W, Iribarren C, Isomaa B, Jacobs K, Jarick M, Jewell E, John U, Jørgensen T, Jousilahti P, Jula A, Kaakinen M, Kajantie E, Kaplan L M, Kathiresan S, Kettunen J, Kinnunen L, Knowles J W, Kolcic I, König I R, Koskinen S, Kovacs P, Kuusisto J, Kraft P, Kvaloy K, Laitinen J, Lantieri O, Linsen L, Launer L J, Lecoeur C, Lehtimäki T, Lettre G, Liu Y, Lokki M-L, Lorentzon M, Luben R N, Ludwig B, Mogoanta L, Marek A, Marre M, Martin N G, McArdle W L, McCarthy A, McKnight B, Meitinger T, Melander O, Meyre D, Midthjell K, Montgomery G W, Morken M A, Morris A P, Mohlke K L, Nicolai P, Nelis M, Neville M J, Nyholt D R, O'Donnell CH J, OReilly D, Ong Y K, Oostra B A, Paré G, Parker A N, Perola M, Pichler I, Pietiläinen K H, Platou C G P, Polasek O, Pouta A, Rafelt S, Raitakari O, Rayner N W, Ridderstråle M, Rief W, Rockelein G, Robertson N R, Rzehak P, Salomaa V, Sanders A R, Sandhu M S, Sanna S, Saramies J, Salonen J, Schipf S, Schreiber S, Schunkert H, Silander K, Sinisalo J, Siscovick D S, Smit J H, Soranzo N, Sovio U, Stephens J, Surakka I, Swift A J, Tammesoo M-L, Tardif J-C, Teder-Laving M, Teslovich T M, Thompson J R, Thomson B, Tönjes A, Tuomi T, van Meurs J B J, van Ommen G-J, Vatin V, Viikari J, Visvikis-Siest S, Vitart V, Vogel C I G, Voight B F, Waite P, Wallaschofski H, Walters G B, Widen E, Wiegand S, Wild S H, Willemsen G, Witte D R, Witteman J C, Xu X, Zhang Q, Zgaga L, Ziegler A, Zitting P, Beilby J P, Fricke H-J, Hebebrand J, Huikuri H V, James A L, Kähönen M, Levinson D F, Milchert M, Nieminen M S, Ohlsson C, Palmer L J, Ridker P M, Stumvoll M, Beckmann J S, Boeing H, Boerwinkle E, Boomsma D I, Caulfield M, Chanock S J, Collins F S, Cupples L A, Smith G D, Erdmann J, Froguel P, Grönberg H, Gyllensten U, Hall P, Hansen T, Harris T B, Hattersley A T, Hayes R B, Heinrich J, Hu F B, Hveem K, Illig T, Jarvelin M-R, Kaprio J, Karpe F, Khaw K-T, Kiemeney L, Krude H, Laakso M, Lawlor D A, Metspalu A, Munroe P B, Ouwehand W H, Pedersen O, Penninx B W, Peters A, Pramstaller P P, Quertermous T, Reinehr T, Rissanen A, Rudan I, Samani N J, Schwarz P S, Shuldiner A R, Spector T D, Tuomilehto J, Uda M, Uitterlinden A G, Valle T T, Wendisch J, Waeber G, Wareham N J, Watkins H, Wilson J F, Wright A F, Zillikens M C, Chatterjee I, McCarroll S A, Purcell S, Schadt E E, Visscher P M, Assimes T L, Borecki I B, Deloukas P, Fox C S, Groop L C, Haritunians T, Hunter D J, Kaplan R C, Mohlke K L, O'Connell J R, Peltonen L, Schlessinger D, Strachan D P, van Duijn C M, Wichmann H-E, Frayling T M, Thorsteinsdottir U, Abecasis G R, Barroso I, Boehnke M, Stefansson K, North K E, McCarthy M I, Hirschhorn J N, Ingelsson E, Loos R J F. Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index. NAT GENET 2010, 42(11):937-48 Sträuber H, Hübschmann T, Jehmlich N, Schmidt F, von Bergen M, Harms H, Müller S. NBDT (3-(N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)amino)-3-toluene)-A novel fluorescent dye for studying mechanisms of toluene uptake into vital bacteria. CYTOM PART A 2010, 77(2):113-120 Tabara Y, Kohara K, Kita Y, Hirawa N, Katsuya T, Ohkubo T, Hiura Y, Tajima A, Morisaki T, Miyata T, Nakayama T, Takashima N, Nakura J, Kawamoto R, Takahashi N, Hata A, Soma M, Imai Y, Kokubo Y, Okamura T, Tomoike H, Iwai N, Ogihara T, Inoue I, Tokunaga K, Johnson T, Caulfield M, Munroe P, Umemura S, Ueshima H, Maak B, Teumer A, Ernst F, Homuth G, Völker U, et al. Common variants in the ATP2B1 gene are associated with susceptibility to hypertension: the Japanese Millennium Genome Project. HYPERTENSION 2010, 56(5):973-80 Thanh T N, Jürgen B, Bauch M, Liebeke M, Lalk M, Ehrenreich A, Evers S, Maurer K-H, Antelmann H, Ernst F, Homuth G, Hecker M, Schweder T. Regulation of acetoin and 2,3-butanediol utilization in Bacillus licheniformis. APPL MICROBIOL BIOT 2010, 87(6):2227-35 Thiele T, Steil L, Völker U, Greinacher A. Transfusion Medicine and Proteomics. Alliance or coexistence?. Blood Transfusion 2010, 8:16-25 Wolf D, Kalamorz F, Wecke T, Jusczak A, Mäder U, Homuth G, Jordan S, Kirstein J, Hoppert M, Voigt B, Hecker M, Mascher T. In-depth profiling of the LiaR response of Bacillus subtilis. J BACTERIOL 2010, 192(18):4680-93
2009
Aakvika T, Degnes K, Dahlsruda R, Schmidt F, Dam R, Yub L, Völker U, Ellingsen T, Valla S. A plasmid RK2-based broad-host-range cloning vector useful for transfer of metagenomic libraries to a variety of bacterial species. FEMS MICROBIOL LETT 2009, 149-158. Bauer L, Venz S, Junker H, Brandt R, Radons J. Nicotinamide phosphoribosyltransferase and prostaglandin H2 synthase 2 are up-regulated in human pancreatic adenocarcinoma cells after stimulation with interleukin-1. INT J ONCOL 2009, 35(1):97-107. Becher D, Hempel K, Wolff S, Zühlke D, Pané-Farré J, Otto A, Fuchs S, Albrecht D, Bernhardt J, Engelmann S, Völker U, van Dijl J M, Hecker M. A proteomic view of an important human pathogen--towards the quantification of the entire Staphylococcus aureus proteome. PLoS ONE 2009, 4(12):e8176. Blom E-J, van Hijum S A F T, Hofstede K J, Silvis R, Roerdink J B T M, Kuipers O P. DISCLOSE : DISsection of CLusters Obtained by SEries of transcriptome data using functional annotations and putative transcription factor binding sites. BMC BIOINFORMATICS 2009, 9:535. Brouwer N, van Hijum S A F T, Kuipers O P. MINOMICS: visualizing prokaryote transcriptomics and proteomics data in a genomic context. BIOINFORMATICS 2009, 25(1):139-140. Commichau F M, Rothe F M, Herzberg C, Wagner E, Hellwig D, Lehnik-Habrink M, Hammer E, Völker U, Stülke J. Novel activities of glycolytic enzymes in Bacillus subtilus: Interactions with essential proteins involved in mRNA processing. MOL CELL PROTEOMICS 2009, 8(6):1350-60. Depke M, Steil L, Domanska G, Völker U, Schütt CH, Kiank C. Altered hepatic mRNA expression of immune response and apoptosis-associated genes after acute and chronic psychological stress in mice. MOL IMMUNOL 2009, 46(15):3018-28. Eichstaedt S, Gäbler K, Below S, Müller CH, Kohler CH, Engelmann S, Hildebrandt P, Völker U, Hecker M, Hildebrandt J-P. Effects of Staphyloccus aureus-hemolysin A on calcium signalling in immortalized human airway epithelial cells. CELL CALCIUM 2009, 45(2):165-76. Farajzadeh Deroee A, Oweinah J, Naraghi M, Hosemann W, Athari B, Völker U, Scharf CH. Regression of polypoid nasal mucosa after systemic corticosteroid therapy: a proteomics study. AM J RHINOL 2009, 23(5):480-5. Ganesh S K, Zakai N A, van Rooij F J A, Soranzo N, Smith A V, Nalls M A, Chen M-H, Kottgen A, Glazer N L, Dehghan A, Kühnel B, Aspelund T, Yang Q, Tanaka T, Jaffe A, Bis J C, Verwoert G C, Teumer A, Fox C S, Guralnik J M, Ehret G B, Rice K, Felix J F, Rendon A, Eiriksdottir G, Levy D, Patel K V, Boerwinkle E, Rotter J I, Hofman A, Sambrook J G, Hernandez D G, Zheng G, Bandinelli S, Singleton A B, Coresh J, Lumley T, Uitterlinden A G, Vangils J M, Launer L J, Cupples L A, Oostra B A, Zwaginga J-J, Ouwehand W H, Thein S L, Meisinger CH, Deloukas P, Nauck M, Spector T D, Gieger CH, Gudnason V, van Duijn C M, Psaty B M, Ferrucci L, Chakravarti A, Greinacher A, O'Donnell CH J, Witteman J C, Furth S, Cushman M, Harris T B, Lin J-P. A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium. NAT GENET 2009, 41(11):1191-1198. Grisk O, Steinbach A CH, Ciecholewski S, Schlter T, Klöting I, Schmidt H, Schröder E, Schaeffeler E, Steil L, Gauer S, Jedlitschky G, Schwab M, Geisslinger G, Hauser I A, Völker U, Kroemer H K, Rettig R. Multidrug resistance-related protein 2 genotype of the donor affects kidney graft function. PHARMACOGENET GENOM 2009, 19(4):276-288. Heine F, Stahl F, Sträuber H, Wiacek C, Benndorf D, Repenning C, Schmidt F, Scheper T, von Bergen M, Harms H, et al. Prediction of flocculation ability of brewing yeast inoculates by flow cytometry, proteome analysis, and mRNA profiling. CYTOM PART A 2009, 75(2):140-7. Jehmlich N, Schmidt F, Taubert M, Seifert J, von Bergen M, Richnow H-H, Vogt C. Comparison of methods for simultaneous identification of bacterial species and determination of metabolic activity by protein-based stable isotope probing (Protein-SIP) experiments. RAPID COMMUN MASS SP 2009, 23(12):1871-8. Kollerits B, Coassin S, Beckmann N D, Teumer A, Kiechl S, Döring A, Kavousi M, Hunt S C, Lamina C, Paulweber B, Kutalik Z, Nauck M, van Duijn C M, Heid I M, Willeit J, Brandstätter A, Adams T D, Mooser V, Aulchenko Y S, Völzke H, Kronenberg F. Genetic evidence for a role of adiponutrin in the metabolism of apolipoprotein B-containing lipoproteins. HUM MOL GENET 2010, 18(23):4669-76 Kolz M, Johnson T, Sanna S, Teumer A, Vitart V, Perola M, Mangino M, Albrecht E, Wallace CH, Farrall M, Homuth G, Völker U, Völzke H, et al. Meta-analysis of 28,141 individuals identifies common variants within five new loci that influence uric acid concentrations. PLOS GENET 2009, 5(6):1-2. Kouwen T R H M, van der Ploeg R, Antelmann H, Hecker M, Homuth G, Mäder U, van Dijl J M. Overflow of a hyper-produced secretory protein from the Bacillus Sec pathway into the Tat pathway for protein secretion as revealed by proteogenomics. PROTEOMICS 2009, 9(4):1018-32. Mohr H, Steil L, Gravemann U, Thiele T, Hammer E, Greinacher A, Müller T H, Völker U. A novel approach to pathogen reduction in platelet concentrates using UVC light. TRANSFUSION 2009, 49:2612-2624. Newton-Cheh CH, Johnson T, Gateva V, Teumer A, Ernst F, Homuth G, Völker U, et al. Genome-wide association study identifies eight loci associated with blood pressure. NAT GENET 2009, 41:666-676. Nguyen T T H, Eiamphungporn W, Mäder U, Liebeke M, Lalk M, Hecker M, Helmann J D, Antelmann H. Genome-wide responses to carbonyl electrophiles in Bacillus subtilis: control of the thiol-dependent formaldehyde dehydrogenase AdhA and cysteine proteinase YraA by the MerR-family regulator YraB (AdhR). MOL MICROBIOL 2009, 71(4):876-894. Rameshwaram N R, Karanam N K, Scharf CH, Völker U, Nadimpalli S K. Complete primary structure of a newly characterized galactose-specific lectin from the seeds of Dolichos lablab. GLYCOCONJUGATE J 2009, 26(2):161-172. Schmidt F, Fiege T, Hustoft H K, Kneist S, Thiede B. Shotgun mass mapping of Lactobacillus species and subspecies from caries related isolates by MALDI-MS. PROTEOMICS 2009, 9(7):1994-2003. Schmidt F, Schmid M, Thiede , Pleißner , Böhme K, Jungblut P R. Assembling proteomics data as a prerequisite for the analysis of large scale experiments. Chemistry Central Journal 2009, 3(1):2. Soranzo N, Spector T D, Mangino M, Kühnel B, Rendon A, Teumer A, Willenborg CH, Wright B, Chen L, Li M, Salo P, Voight B F, Burns P, Laskowski R A, Xue Y, Menzel S, Altshuler D, Bradley J R, Bumpstead S, Burnett M-S, Devaney J, Döring A, Elosua R, Epstein S E, Erber W, Falchi M, Garner S F, Ghori M J R, Goodall A H, Gwilliam R, Hakonarson H H, Hall A S, Hammond N, Hengstenberg CH, Illig T, König I R, Knouff CH W, McPherson R, Melander O, Mooser V, Nauck M, Nieminen M S, O'Donnell CH J, Peltonen L, Potter S C, Prokisch H, Rader D J, Rice C M, Roberts R, Salomaa V, Sambrook J, Schreiber S, Schunkert H, Schwartz S M, Serbanovic-Canic J, Sinisalo J, Siscovick D S, Stark K, Surakka I, Stephens J, Thompson J R, Völker U, Völzke H, Watkins N A, Wells G A, Wichmann H-E, Van Heel D A, Tyler-Smith CH, Thein S L, Kathiresan S, Perola M, Reilly M P, Stewart A F R, Erdmann J, Samani N J, Meisinger CH, Greinacher A, Deloukas P, Ouwehand W H, Gieger CH. A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium. NAT GENET 2009, 41(11):1182-90. van Hijum S A F T, Medema M, Kuipers O. Mechanisms and evolution of control logic in prokaryotic transcriptional regulation. MICROBIOL MOL BIOL R 2009, 73(3):481-509, Table o. Vasan R S, Glazer N L, Felix J F, Lieb W, Wild P S, Felix S B, Watzinger N, Larson M G, Smith N L, Dehghan A, Grosshennig A, Schillert A, Teumer A, Schmidt R, Kathiresan S, Lumley T, Aulchenko Y S, König I R, Zeller T, Homuth G, Struchalin M, Aragam J, Bis J C, Rivadeneira F, Erdmann J, Schnabel R B, Dörr M, Zweiker R, Lind L, Rodeheffer R J, Greiser K H, Levy D, Haritunians T, Deckers J W, Stritzke J, Lackner K J, Völker U, Ingelsson E, Kullo I, Haerting J, O'Donnell CH J, Heckbert S R, Stricker B H, Ziegler A, Reffelmann T, Redfield M M, Werdan K, Mitchell G F, Rice K, Arnett D K, Hofman A, Gottdiener J S, Uitterlinden A G, Meitinger T, Blettner M, Friedrich N, Wang T J, Psaty B M, van Duijn C M, Wichmann H-E, Munzel T F, Kroemer H K, Benjamin E J, Rotter J I, Witteman J C, Schunkert H, Schmidt H, Völzke H, Blankenberg S. Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data. JAMA-J AM MED ASSOC 2009, 302(2):168-178. Wecke T, Zühlke D, Mäder U, Jordan S, Voigt B, Pelzer S, Labischinski H, Homuth G, Hecker M, Mascher T. Daptomycin versus Friulimicin B: in-depth profiling of Bacillus subtilis cell envelope stress responses. ANTIMICROB AGENTS CH 2009, 53(4):1619-23.
2008
Dreisbach A, Otto A, Becher D, Hammer E, Teumer A, Gouw J W, Hecker M, Völker U. Monitoring of changes in the membrane proteome during stationary phase adaptation of Bacillus subtilis using in vivo labeling techniques. PROTEOMICS 2008, 8(10):2062-76 . i Eichstaedt, S., Gabler, K., Below, S., Muller, C., Kohler, C., Engelmann, S., Hildebrandt, P., Völker, U., Hecker, M., and Hildebrandt, J.P. (2008). Effects of Staphylococcus aureus-hemolysin A on calcium signalling in immortalized human airway epithelial cells. Cell Calcium.
Gedrange T, Weingärtner J, Hoffmann A, Homuth G, Ernst F D, Bokan I, Mai R, Proff P. Development of an improved protocol to analyse gene expression in temporomandibular joint condylar cartilage of rats using DNA microarrays. Adv Med Sci 2008, 53(2):191-7 .
Grumann D, Scharf J, Holtfreter S, Kohler CH, Steil L, Engelmann S, Hecker M, Völker U, Bröker C. Immune cell activation by enterotoxin gene cluster (egc)-encoded and non-egc superantigens from Staphylococcus aureus. J IMMUNOL 2008, 181(7):5054-61 .
Heine , Stahl , Sträuber , Wiacek , Benndorf , Repenning , Schmidt F, Scheper T, von Bergen , Harms , Müller. Prediction of flocculation ability of brewing yeast inoculates by flow cytometry, proteome analysis, and mRNA profiling. CYTOM PART A 2008, 75(2):140-147 .
Jehmlich N, Schmidt F, Hartwich M, von Bergen M, Richnow H-H, Vogt C. Incorporation of carbon and nitrogen atoms into proteins measured by protein-based stable isotope probing (Protein-SIP). RAPID COMMUN MASS SP 2008, 22(18):2889-97 .
Jehmlich N, Schmidt F, von Bergen M, Richnow H-H, Vogt C. Protein-based stable isotope probing (Protein-SIP) reveals active species within anoxic mixed cultures. ISME J 2008, 2(11):1122-33 .
Landsberger M, Staudt A, Choudhury S, Trimpert CH, Herda L, Klingel K, Kandolf R, Schultheiss H-P, Kroemer H K, Völker U, Felix S B. Potential role of antibodies against cardiac Kv channel-interacting protein 2 in dilated cardiomyopathy. AM HEART J 2008, 156(1):92-99.e2 .
Mäder U, Zig L, Kretschmer J, Homuth G, Putzer H. mRNA processing by RNases J1 and J2 affects Bacillus subtilis gene expression on a global scale. MOL MICROBIOL 2008, 70(1):183-96 .
Manda K, Gördes D, Mikolasch A, Hammer E, Schmidt E, Thurow K, Schauer F. Carbon-oxygen bond formation by fungal laccases: cross-coupling of 2,5-dihydroxy-N-(2-hydroxyethyl)-benzamide with the solvents water, methanol, and other alcohols. APPL MICROBIOL BIOT 2008, 76(2):407-16 .
Meissner K, Kessler W, Meyer zu Schwabedissen H, Schuster K, Saalfeld K, Grube M, Buck A, Jedlitschky G, Maier S, Traeger T, Mostertz J, Homuth G, Heidecke C-D, Lehmann CH, Kroemer H K. Sepsis affects cardiac expression of multidrug resistance protein 5 (MRP5, ABCC5), an ABC-type CGMP export pump. SHOCK 2008, 28(5):564-9 .
Mikolasch A, Hessel S, Gesell Salazar M, Neumann H, Manda K, Gördes D, Schmidt E, Thurow K, Hammer E, Lindequist U, Beller M, Schauer F. Synthesis of New N-Analogous Corollosporine derivatives with antibacterial activity by laccase-catalyzed amination. CHEM PHARM BULL 2008, 56(6):781-786 .
Mikolasch A, Wurster M, Lalk M, Witt S, Seefeldt S, Hammer E, Schauer F, Jülich W-D, Lindequist U. Novel ß-Lactam Antibiotics Synthesized by Amination of catechols Using Fungal Laccase. CHEM PHARM BULL 2008, 56(7):902-907 .
Mostertz J, Hochgräfe F, Jürgen B, Schweder T, Hecker M. The role of thioredoxin TrxA in Bacillus subtilis: a proteomics and transcriptomics approach. PROTEOMICS 2008, 8(13):2676-90 .
Rameshwaram N R, Karanam N K, Scharf CH, Völker U, Nadimpalli S K. Complete primary structure of a newly characterized galactose-specific lectin from the seeds of Dolichos lablab. Glycoconj J 2008, 26(2):161-72 .
Röhl C, Armbrust E, Kolbe K, Lucius R, Maser E, Venz S, Gülden M. Activated microglia modulate astroglial enzymes involved in oxidative and inflammatory stress and increase the resistance of astrocytes to oxidative stress in vitro. GLIA 2008, 56(10):1114-26 .
Sonnemann J, Hüls I, Sigler M, Palani C D, Hong L T T, Völker U, Kroemer H K, Beck J F. Histone deacetylase inhibitors and aspirin interact synergistically to induce cell death in ovarian cancer cells. ONCOL REP 2008, 20(1):219-24 .
Steil L, Thiele T, Hammer E, Bux J, Kalus M, Völker U, Greinacher A. Proteomic characterization of freeze-dried human plasma: providing treatment of bleeding disorders without the need for a cold chain. TRANSFUSION 2008, 48(11):2356-63 ....
2007
Beyer, S., Mix, E., Hoffrogge, R.,
Lünser, K., Völker, U., and Rolfs, A. (2007). Neuroproteomics in stem cell
differentiation. Clinical Proteomics, in press.
Bien, S., Riad, A., Ritter, C.A.,
Gratz, M., Olshausen, F., Westermann, D., Grube, M., Krieg, T., Ciecholewski,
S., Felix, S.B., et al. (2007). The Endothelin Receptor Blocker Bosentan
Inhibits Doxorubicin-Induced Cardiomyopathy. Cancer Res 67, 10428-10435.
Costa, T., Serrano, M., Steil, L.,
Völker, U., Moran, C.P., Jr., and Henriques, A.O. (2007). The timing of cotE
expression affects Bacillus subtilis spore coat morphology but not lysozyme
resistance. J Bacteriol 189, 2401-2410.
Duy, N.V., Mäder, U., Tran, N.P.,
Cavin, J.F., Tam le, T., Albrecht, D., Hecker, M., and Antelmann, H. (2007).
The proteome and transcriptome analysis of Bacillus subtilis in response to
salicylic acid. Proteomics 7, 698-710.
Grabarczyk, P., Przybylski, G.K.,
Depke, M., Völker, U., Bahr, J., Assmus, K., Bröker, B.M., Walther, R., and
Schmidt, C.A. (2007). Inhibition of BCL11B expression leads to apoptosis of
malignant but not normal mature T cells. Oncogene 26, 3797-3810.
Hecker, M., Pane-Farre, J., and
Völker, U. (2007). SigB-dependent general stress response in Bacillus
subtilis and related gram-positive bacteria. Annu Rev Microbiol 61, 215-236.
Hoffrogge, R., Beyer, S., Hubner, R.,
Mikkat, S., Mix, E., Scharf, C., Schmitz, U., Pauleweit, S., Berth, M.,
Zubrzycki, I.Z., et al. (2007). 2-DE profiling of GDNF overexpression-related
proteome changes in differentiating ST14A rat progenitor cells. Proteomics 7,
33-46.
Junker, H., Suofu, Y., Venz, S.,
Sascau, M., Herndon, J.G., Kessler, C., Walther, R., and Popa-Wagner, A.
(2007). Proteomic identification of an upregulated isoform of annexin A3 in
the rat brain following reversible cerebral ischemia. Glia
55, 1630-1637.
Kallwellis-Opara, A., Staudt, A., Trimpert, C., Noutsias, M.,
Kühl, U., Pauschinger, M., Schultheiss, H.P., Grube, M., Böhm, M., Baumann,
G., et al. (2007). Immunoadsorption and
subsequent immunoglobulin substitution decreases myocardial gene expression
of desmin in dilated cardiomyopathy. J Mol Med 85, 1429-1435.
Kumar, K.S., Sonnemann, J., Hong Le,
T.T., Buurman, C., Adler, F., Maass, M., Völker, U., and Beck, J.F. (2007).
Histone deacetylase inhibitors, but not vincristine, cooperate with
radiotherapy to induce cell death in medulloblastoma. Anticancer Res 27,
465-470.
Mäder, U., Homuth, G., Völker, U., and
Hecker, M. (2007). Global regulatory systems mediating general starvation
responses in Bacillus subtilis. In Global Regulatory Networks in Bacillus
subtilis, Y. Fujita, ed. (Kerala, India, Transworld Research Network), pp.
205-228.
Manda, K., Gordes, D., Mikolasch, A.,
Hammer, E., Schmidt, E., Thurow, K., and Schauer, F. (2007). Carbon-oxygen
bond formation by fungal laccases: cross-coupling of
2,5-dihydroxy-N-(2-hydroxyethyl)-benzamide with the solvents water, methanol,
and other alcohols. Appl Microbiol Biotechnol 76, 407-416.
Meissner, K., Kessler, W., Meyer zu Schwabedissen, H.E.,
Schuster, K., Saalfeld, K., Grube, M., Buck, A., Jedlitschky, G., Maier, S.,
Traeger, T., et al. (2007).
Sepsis affects cardiac expression of multidrug resistance protein 5 (MRP5,
ABCC5), an ABC-type CGMP export pump. Shock 28, 564-569.
Mikolasch, A., Niedermeyer, T.H., Lalk, M., Witt, S.,
Seefeldt, S., Hammer, E., Schauer, F., Gesell Salazar, M., Hessel, S.,
Julich, W.D., et al. (2007).
Novel cephalosporins synthesized by amination of 2,5-dihydroxybenzoic acid
derivatives using fungal laccases II. Chem Pharm Bull (Tokyo) 55, 412-416.
Nguyen, V.D., Wolf, C., Mäder, U.,
Lalk, M., Langer, P., Lindequist, U., Hecker, M., and Antelmann, H. (2007).
Transcriptome and proteome analyses in response to 2-methylhydroquinone and
6-brom-2-vinyl-chroman-4-on reveal different degradation systems involved in
the catabolism of aromatic compounds in Bacillus subtilis. Proteomics 7,
1391-1408.
Reeves, A., Gerth, U., Völker, U., and
Haldenwang, W.G. (2007). ClpP modulates the activity of the Bacillus subtilis
stress response transcription factor, SigB. J Bacteriol 189, 6168-6175.
Sonnemann, J., Dreyer, L., Hartwig,
M., Palani, C.D., Hong le, T.T., Klier, U., Bröker, B., Völker, U., and Beck,
J.F. (2007). Histone deacetylase inhibitors induce cell death and enhance the
apoptosis-inducing activity of TRAIL in Ewing's sarcoma cells. J Cancer Res
Clin Oncol 133, 847-858.
Thiele, T., Steil, L., Gebhard, S.,
Scharf, C., Hammer, E., Brigulla, M., Lubenow, N., Clemetson, K.J., Völker,
U., and Greinacher, A. (2007a). Profiling of alterations in platelet proteins
during storage of platelet concentrates. Transfusion 47, 1221-1233.
Thiele, T., Steil, L., Völker, U., and Greinacher, A. (2007b). Proteomics of blood-based
therapeutics: a promising tool for quality assurance in transfusion medicine. BioDrugs 21, 179-193.
2006
Allenby,
N. E. E., Watts, C. A., Homuth, G., Pragai, Z., Wipat, A., Ward, A. C.,
and Harwood, C. R. (2006). Phosphate starvation induces the sporulation
killing factor of Bacillus subtilis. Journal of Bacteriology, 188, 5299-5303.
Brigulla,
M., Thiele, T., Scharf, C., Breitner-Ruddock, S., Venz, S., Völker, U., and
Greinacher, A. (2006). Proteomics as a tool for assessment of therapeutics in
transfusion medicine: Evaluation of prothrombin complex concentrates. Transfusion,
46, 377-385.
Budde, I., Steil, L., Scharf, C., Völker, U., and Bremer, E.
(2006). Adaptation of Bacillus subtilis to growth at low temperature: a combined transcriptomic and proteomic
appraisal. Microbiology, 152, 831-853.
Ernst,
F., Stoof, J., Horrevoets, W. M., Kuipers, E. J., Kusters, J. G., and van
Vliet, A. H. M. (2006). NikR mediates nickel-responsive transcriptional
repression of the Helicobacter pylori outer membrane proteins FecA3 (HP1400)
and FrpB4 (HP1512). Infection and immunity, 74, 6821-6828.
Hecker,
M., and Völker, U. (2006). Towards a comprehensive understanding of Bacillus
subtilis cell physiology by physiological proteomics. In:
Peter R. Jungblut, Michael Hecker (Hrsg) Proteomics of Microbial Pathogens.
1. Aufl., Weinheim: Wiley VCH Verlag GmbH, 31-62, 3-527-31759-7.
Hoffrogge, R., Beyer, S., Völker, U., Uhrmacher, A., and Rolfs,
A. (2006). 2-DE proteomic profiling of neuronal
stem cells. Neuro-degenerative diseases, 3, 112-121.
Hoffrogge, R., Mikkat, S., Scharf, C., Beyer, S., Christoph,
H., Pahnke, J., Mix, E., Berth, M., Uhrmacher, A., Zubrycki, I., Miljan, E.,
Völker, U., and Rolfs, A. (2006). 2-DE
proteome analysis of a proliferating and differentiating human neuronal stem
cell line (ReNcell VM). Proteomics, 6, 1833-1847.
Manda, K., Hammer, E., Mikolasch, A., Gördes, D., Thurow, K.,
and Schauer, F. (2006). Laccase-induced
derivatization of unprotected amino acid L-tryptophan by coupling with
p-hydroquinone 2,5-dihydroxy-N-(2-hydroxyethyl)-benzamide. Amino Acids, 31,
409-19.
Manteca,
A., Mäder, U., Connolly, B. A., and Sanchez, J. (2006). A proteomic analysis
of Streptomyces coelicolor programmed cell death. Proteomics, 6, 6008-6022.
Martin,
H. J., Breyer-Pfaff, U., Wsol, V., Venz, S., Block, S., and Maser, E. (2006).
Purification andcharacterization of AKR1B10 from human liver: role in
carbonyl reduction of xenobiotics. Drug Metabolism and
Disposition, 34, 464-470.
Meyer zu Schwabedissen, H. E., Dreisbach, A., Hammer, E.,
Fusch, C., Hecker, M., Völker, U., and Kroemer, H. K. (2006). Direct mass spectrometric
identification of ABCB1 (P-glycoprotein/MDR1) from the apical membrane
fraction of human placenta using fourier transform ion cyclotron mass
spectrometry. Pharmacogenetics and genomics, 16, 385-389.
Meyer zu Schwabedissen, H. E., Grube, M., Dreisbach, A.,
Jedlitschky, G., Meissner, K., Linnemann, K., Fusch, C., Ritter, C.A.,
Völker, U., and Kroemer, H.K. (2006). Epidermal growth factor-mediated activation of the
map kinase cascade results in altered expression and function of ABCG2
(BCRP). Drug Metabolism and Disposition , 34, 524-533.
Mikolasch, A., Niedermeyer, T., Lalk, M., Witt, S., Seefeldt,
S., Hammer, E., Schauer, F., Gesell, M., Hessel, S., Jüllich, W. D., and
Lindequist, U. (2006). Novel
penicillins synthesized by biotransformation using laccase from Trametes
spec. Chemical & pharmaceutical bulletin, 54, 632-638.
Saparrat,
M. C., and Hammer, E. (2006). Decolorization of synthetic dyes by the
deuteromycete Pestalotiopsis guepinii CLPS no. 786 strain. Journal of basic
microbiology, 46, 28-33.
Sietmann,
R., Gesell, M., Hammer, E., and Schauer, F. (2006). Oxidative ring cleavage
of low chlorinated biphenyl derivatives by fungi leads to the formation of
chlorinated lactone derivatives. Chemosphere, 64, 672-685.
Zimmermann, U., Teller, S., Woenckhaus, C., Venz, S.,
Langheinrich, M., Protzel, C., Beiersdorf, S., Maile, S., Junker, H., and
Giebel, J. (2006). Expression of
Annexin AI in conventional renal cell carcinoma(CRCC) correlates with tumour
stage, Fuhrman grade, amount of eosinophilic cells and clinical outcome.
Histology and histopathology, in press.
2005
Ciecholewski,
S., Hammer, E., Manda, K., Bose, G., Nguyen, Van T. H., Langer, P., and
Schauer, F. (2005). Laccase-catalyzed carbon-carbon bond formation: oxidative
dimerization of salicylic esters by air in aqueous solution. Tetrahedron,
61, 4615-4619.
Ernst,
F., Bereswill, S., Waidner, B., Stoof, J., Mäder, U., Kusters, J. G.,
Kuipers, E. J., Kist, M., van Vliet, A. H., and Homuth, G. (2005). Transcriptional profiling of
Helicobacter pylori Fur- and iron-regulated gene expression. Microbiology,
151, 533-546.
Ernst,
F., Homuth, G., Stoof, J., Mäder, U., Waidner, B., Kuipers, E. J., Kist, M.,
Kusters, J. G., Bereswill, S., and van Vliet, A. H. (2005). Iron-responsive
regulation of the Helicobacter pylori iron-cofactored superoxide dismutase
SodB is mediated by Fur. Journal of Bacteriology, 187, 3687-3692.
Glissmann,
K., Hammer, E., and Conrad, R. (2005). Production of aromatic compounds
during methanogenic degradation of straw in rice field soil. FEMS
Microbiology Ecology, 52, 43-48.
Höper,
D., Völker, U., and Hecker, M. (2005). Comprehensive characterization of the
contribution of individual SigB-dependent general stress genes to stress
resistance of Bacillus subtilis. Journal of Bacteriology , 187,
2810-2826.
Koburger,
T., Weibezahn, J., Bernhardt, J., Homuth, G., and Hecker, M. (2005).
Genome-wide mRNA profiling in glucose starved Bacillus subtilis cells.
Molecular genetics and genomics, 274, 1-12.
Manda,
K., Hammer, E., Mikolasch, A., Niedermeyer, T., Dec, J., Jones, A. D.,
Benesi, A. J., Schauer, F., and Bollag, J. M. (2005). Laccase-induced
cross-coupling of 4-aminobenzoic acid with para-dihydroxylated
compounds 2,5-dihydroxy-N-(2-hydroxyethyl)-benzamide and
2,5-dihydroxybenzoic acid methyl ester. Journal of Molecular Catalysis B:
Enzymatic, 35, 86-92.
Romero,
M. C., Hammer, E., Hanscke, R., Arambarri, A. M., and Schauer, F. (2005).
Biotransformation of biphenyl by the filamentous fungus Talaromyces
helicus. World Journal of Microbiology and Biotechnology, 21, 101-106.
Steil, L., Serrano, M., Henriques, A. O., and Völker, U.
(2005). Genome-wide analysis of temporally
regulated and compartment-specific gene expression in sporulating cells of Bacillus
subtilis. Microbiology, 151, 399-420.
Völker,
U., and Hecker, M. (2005). From genomics via proteomics to cellular
physiology of the Gram-positive model organism Bacillus subtilis.
Cellular Microbiology, 7, 1077-1085.
Wesche,
J., Hammer, E., Becher, D., Burchhardt, G., and Schauer, F. (2005). The bphC gene-encoded
2,3-dihydroxybiphenyl-1,2-dioxygenase is involved in complete degradation of
dibenzofuran by the biphenyl-degrading bacterium Ralstonia sp. SBUG 290.
Journal of Applied Microbiology, 98, 635-645.
Zilhao,
R., Isticato, R., Martins, L. O., Steil, L., Völker, U., Ricca, E., Moran, C.
P., and Henriques, A. O. (2005). Assembly and function of a spore
coat-associated transglutaminase of Bacillus subtilis. Journal of
acteriology, 187, 7753-7764.
2004
Bien, S., Ritter, C.A., Kranz M., Scharf, C., Steil, L.,
Hummel, M., Völker, U., Cascorbi, I., and Kroemer H.K. (2004). Influence of doxorubicin on gene
expression and protein pattern in HeLa cells. Int J Clin Pharmacol Ther 42,
640-641.
Costa,
T., Steil, L., Martins, L. O., Völker, U., and Henriques, A. O. (2004).
Assembly of an oxalate Delumeau,
O., Dutta, S., Brigulla, M., Kuhnke, G., Hardwick, S. W., Völker, U., Yudkin,
M., and Lewis, R. Eymann, C., Dreisbach, A., Albrecht, D., Bernhardt, J.,
Becher, D., Gentner, S., Tam, L., Büttner, K., Gesell, M., Hammer, E., Mikolasch, A., and Schauer, F. (2004). Oxidation and ring cleavage of
dibenzofuran Hecker,
M., and Völker, U. (2004). Towards a comprehensive understanding of Bacillus
subtilis cell Holtmann, G., Brigulla, M., Steil, L., Schütz, A., Barnekow,
K., Völker, U., and Bremer, E. (2004). RsbV- Laukel,
M., Rossignol, M., Borderies, G., Völker, U., and Vorholt, J. A. (2004).
Comparison of the proteome Mostertz,
J., Scharf, C., Hecker, M., and Homuth, G. (2004). Transcriptome and proteome
analysis of Walther,
R., Blabanov, S., Junker H., Scharf, C., and Zimmermann, U. (2004). Proteome
analysis of renal cell carcinoma to develop new strategies in diagnosis and
therapiy. Int J Clin Pharmacol Ther 42, 0-1.
Zimmermann, U., Balabanov, S., Giebel, J., Teller, S., Junker,
H., Schmoll, D., Protzel, C., Scharf, C., Kleist,
2003
Bernhardt, J., Weibezahn, J., Scharf, C., and Hecker, M.
(2003). Bacillus subtilis during feast and famine: Brigulla, M., Hoffmann, T., Krisp, A., Völker, A., Bremer, E.,
and Völker, U. (2003). Chill
induction of the SigB- Leichert, L. I., Scharf, C., and Hecker, M. (2003). Global characterization of disulfide
stress in Bacillus Mikolasch,
A., Hammer, E., and Schauer, F. (2003). Synthesis of imidazol-2-yl amino
acids by using cells Münzenberger,
B., Hammer, E., Wray, V., Schauer, F., Schmidt, J., and Strack, D. (2003).
Detoxification of Pilz, R., Hammer, E., Schauer, F., and Kragl, U. (2003). Laccase-catalysed synthesis of
coupling products Sonawane,
A., Klöppner, U., Hövel, S., Völker, U., and Röhm, K. H. (2003).
Identification of Pseudomonas Steil, L., Hoffmann, T., Budde, I., Völker, U., and Bremer, E.
(2003). Genome-wide transcriptional profiling
2002
Beckering, C. L., Steil, L., Weber, M. H., Völker, U., and
Marahiel, M. A. (2002). Genomewide
transcriptional Brock, M., Maerker, C., Schütz, A., Völker, U., and Buckel, W.
(2002). Oxidation of propionate to pyruvate in Eppler, T., Postma, P., Schütz, A., Völker, U., and Boos, W.
(2002). Glycerol-3-phosphate-induced
catabolite Eymann,
C., Homuth, G., Scharf, C., and Hecker, M. (2002). Bacillus subtilis functional genomics: global Hoffmann, T., Schütz, A., Brosius, M., Völker, A., Völker, U.,
and Bremer, E. (2002). High-salinity-induced Mäder, U., Homuth, G., Scharf, C., Büttner, K., Bode, R., and
Hecker, M. (2002). Transcriptome and Möller, A., Malerczyk, C., Völker, U., Stöppler, H., and
Maser, E. (2002). Monitoring
daunorubicin-induced Nyalwidhe, J., Baumeister, S., Hibbs, A. R., Tawill, S.,
Papakrivos, J., Völker, U., and Lingelbach, K. (2002). Romero,
M. C., Hammer, E., Cazau, M. C., and Arambarri, A. M. (2002). Isolation and
characterization of Rost,
R., Haas, S., Hammer, E., Herrmann, H., and Burchhardt, G. (2002). Molecular
analysis of aerobic Sietmann, R., Hammer, E., and Schauer, F. (2002). Biotransformation of biarylic
compounds by yeasts of Stope,
M. B., Becher, D., Hammer, E., and Schauer, F. (2002). Cometabolic ring
fission of dibenzofuran by
2001
Balabanov, S., Zimmermann, U., Protzel, C., Scharf, C.,
Klebingat, K. J., and Walther, R. (2001). Tumour- Bernhardt,
J., Büttner, K., Coppee, L. Y., Lelong, C., Ogasawara, N., Scharf, C.,
Vagner, V., Schmid, R., Büttner, K., Bernhardt, J., Scharf, C., Schmid, R., Mäder, U.,
Eymann, C., Antelmann, H., Völker, A., Völker, Gesell,
M., Hammer, E., Specht, M., Francke, W., and Schauer, F. (2001).
Biotransformation of biphenyl by Hammer,
E., Schoefer, L., Schafer, A., Hundt, K., and Schauer, F. (2001). Formation
of glucoside Hecker,
M., and Völker, U. (2001). General stress response of Bacillus subtilis and other bacteria. Adv Hofmann, K., Hammer, E., Köhler, M., and Bruser, V. (2001). Oxidation of triphenylarsine to Möller, A., Soldan, M., Völker, U., and Maser, E. (2001). Two-dimensional gel electrophoresis: a
powerful Petersohn,
A., Brigulla, M., Haas, S., Hoheisel, J. D., Völker, U., and Hecker, M.
(2001). Global analysis of Sauer, J., Schreiber, U., Schmid, R., Völker, U., and
Forchhammer, K. (2001). Nitrogen
starvation-induced Schultz, A., Jonas, U., Hammer, E., and Schauer, F. (2001). Dehalogenation of chlorinated Serrano,
M., Hövel, S., Moran, C. P., Jr., Henriques, A. O., and Völker, U. (2001).
Forespore-specific Sietmann,
R., Hammer, E., Specht, M., Cerniglia, C. E., and Schauer, F. (2001). Novel
ring cleavage Völker, U., and Hecker, M. (2001). Funktionelle Genomanalyse
im Gram-positiven Modellbakterium |
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